We meet the first Monday of the month from 12 pm – 1 pm at BRF2-1104 (UCSD – School of Medicine Campus – Biomedical Research Facilities 2 building).

CCBB’s Bioinformatics Seminar series is a monthly lunch series featuring local bioinformaticians discussing their tools, research, software, coding, etc. A light lunch will be provided.

Subscribe to our mailing list here.

Upcoming Events:

September 9, 2019: Lukas Chavez (Chavez Lab) will give a talk on “Targeting of tumors as informed by oncogenic 3D genome organization”.

October 7, 2019: Jordan Berg (Rutter Lab, U of Utah) will give a talk, title TBD

November 4, 2019: Olivier Harismendy (Oncogenomics Lab) will give a talk, title TBD

Past Events:

June – August 2019: No seminar series over summer break.

May 6, 2019: Sarah Murray (Center for Advanced Laboratory Medicine, Dept. of Pathology) will give a talk on “Clinical Genomics Testing for Cardiomyopathies and Arrhythmias”.

April 1, 2019: Zhang (Frank) Cheng (Center for Epigenomics) will give a talk on “ATAC-Seq and ChIP-Seq in UCSD Center for Epigenomics”.

March 4, 2019: Nathan Lewis (Lewis Lab) will give a talk on “The convergence of the genetic heterogeneity in Autism”.

February 4, 2019: Trey Ideker (Ideker Lab) will give a talk on “Decoding genomes through the hierarchical architecture of the cell”.

January 7, 2019: Katie Fisch (CCBB) will be presenting project highlights from the CCBB, focusing on the computational methods employed, such as differential RNA editing, single cell RNAseq, network analysis, proteomics and whole genome variant analysis.

February 5, 2018: Dr. Sylvain Costes (NASA Ames Research Center) will give a talk on NASA’s GeneLab Data System.

March 5, 2018: Michael Reich (Mesirov Lab) will give a talk on GenePattern software.

April 2, 2018: Barry Demchak (Ideker Lab) will give a talk on Cytoscape software.

May 7, 2018: Hannah Carter (Carter Lab) will give a talk titled “Are tumors predictable? Inherited genetic variation constrains tumor evolution.

June – September 2018: No seminar series over summer break.

October 1, 2018: Rebecca Colman (Rodwell Lab) will give a talk on “Aligner choice and the effect on rare variant detection capability”.

November 5, 2018: Dexter Pratt (The NDEx Project) will give a talk on “Network Workflows with NDEx and Cytoscape”.

December 3, 2018: Brian Tsui (Carter Lab) will give a talk titled “Skymap: Allelic read counts extracted from 250,000 human sequencing runs in Sequence Read Archive”.

See How CCBB Can Help With Your Bioinformatics Data

Request Free Consult 858-822-6258